Publications in collaboration with researchers from Centro de Biología Molecular Severo Ochoa (9)

2023

  1. Consequences of Genetic Recombination on Protein Folding Stability

    Journal of Molecular Evolution, Vol. 91, Núm. 1, pp. 33-45

2021

  1. The first wave of the COVID-19 epidemic in Spain was associated with early introductions and fast spread of a dominating genetic variant

    Nature Genetics, Vol. 53, Núm. 10, pp. 1405-1414

2020

  1. ProtASR2: Ancestral reconstruction of protein sequences accounting for folding stability

    Methods in Ecology and Evolution, Vol. 11, Núm. 2, pp. 248-257

2019

  1. The Influence of Protein Stability on Sequence Evolution: Applications to Phylogenetic Inference

    Methods in Molecular Biology (Humana Press Inc.), pp. 215-231

  2. The Molecular Clock in the Evolution of Protein Structures

    Systematic Biology, Vol. 68, Núm. 6, pp. 987-1002

2018

  1. Influence of mutation bias and hydrophobicity on the substitution rates and sequence entropies of protein evolution

    PeerJ, Vol. 2018, Núm. 10

  2. Substitution rates predicted by stability-constrained models of protein evolution are not consistent with empirical data

    Molecular Biology and Evolution, Vol. 35, Núm. 3, pp. 743-755

2015

  1. Diverse Considerations for Successful Phylogenetic Tree Reconstruction: Impacts from Model Misspecification, Recombination, Homoplasy, and Pattern Recognition

    Pattern Recognition in Computational Molecular Biology: Techniques and Approaches (wiley), pp. 439-456

  2. Ecological connectivity shapes quasispecies structure of RNA viruses in an Antarctic lake

    Molecular Ecology, Vol. 24, Núm. 19, pp. 4812-4825