Publicacións en colaboración con investigadores/as de Centro Nacional de Investigaciones Oncológicas (18)

2023

  1. PanDrugs2: Prioritizing cancer therapies using integrated individual multi-omics data

    Nucleic Acids Research, Vol. 51, Núm. W1, pp. W411-W418

2021

  1. Compi Hub: A Public Repository for Sharing and Discovering Compi Pipelines

    Advances in Intelligent Systems and Computing

  2. Compi: A framework for portable and reproducible pipelines

    PeerJ Computer Science, Vol. 7, pp. 1-21

  3. DREIMT: a drug repositioning database and prioritization tool for immunomodulation

    Bioinformatics (Oxford, England), Vol. 37, Núm. 4, pp. 578-579

2020

  1. Metatax: Metataxonomics with a Compi-Based Pipeline for Precision Medicine

    Interdisciplinary Sciences: Computational Life Sciences, Vol. 12, Núm. 3, pp. 252-257

  2. Proposal of a New Bioinformatics Pipeline for Metataxonomics in Precision Medicine

    Advances in Intelligent Systems and Computing

2018

  1. Bicycle: A bioinformatics pipeline to analyze bisulfite sequencing data

    Bioinformatics, Vol. 34, Núm. 8, pp. 1414-1415

  2. Nextpresso: Next generation sequencing expression analysis pipeline

    Current Bioinformatics, Vol. 13, Núm. 6, pp. 583-591

  3. PanDrugs: A novel method to prioritize anticancer drug treatments according to individual genomic data

    Genome Medicine, Vol. 10, Núm. 1

2017

  1. RUbioSeq+: A multiplatform application that executes parallelized pipelines to analyse next-generation sequencing data

    Computer Methods and Programs in Biomedicine, Vol. 138, pp. 73-81

2016

  1. RUbioSeq+: An application that executes parallelized pipelines to analyse next-generation sequencing data

    Advances in Intelligent Systems and Computing

2015

  1. A new bioinformatic pipeline to address the most common requirements in RNA-seq data analysis

    Advances in Intelligent Systems and Computing

  2. MiRGate: A curated database of human, mouse and rat miRNA-mRNA targets

    Database, Vol. 2015

2012

  1. New mutations in chronic lymphocytic leukemia identified by target enrichment and deep sequencing

    PLoS ONE, Vol. 7, Núm. 6

2011

  1. PileLine: A toolbox to handle genome position information in next-generation sequencing studies

    BMC Bioinformatics, Vol. 12

  2. PileLineGUI: A desktop environment for handling genome position files in next-generation sequencing studies

    Nucleic Acids Research, Vol. 39, Núm. SUPPL. 2

2009

  1. Current efforts to integrate biological pathway information

    Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)

  2. WhichGenes: A web-based tool for gathering, building, storing and exporting gene sets with application in gene set enrichment analysis

    Nucleic Acids Research, Vol. 37, Núm. SUPPL. 2