Informática
Departamento
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Universidade Do Porto
Oporto, PortugalPublicacións en colaboración con investigadores/as de Universidade Do Porto (58)
2024
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Auto-phylo v2 and auto-phylo-pipeliner: building advanced, flexible, and reusable pipelines for phylogenetic inferences, estimation of variability levels and identification of positively selected amino acid sites
JOURNAL OF INTEGRATIVE BIOINFORMATICS
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Multiple Lines of Evidence Support 199 SARS-CoV-2 Positively Selected Amino Acid Sites
International Journal of Molecular Sciences, Vol. 25, Núm. 4
2023
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Auto-phylo: A Pipeline Maker for Phylogenetic Studies
Lecture Notes in Networks and Systems
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MOZART, a QSAR Multi-Target Web-Based Tool to Predict Multiple Drug–Enzyme Interactions
Molecules, Vol. 28, Núm. 3
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To Enhance Full-Text Biomedical Document Classification Through Semantic Enrichment
Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)
2022
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A Novel Multi-View Ensemble Learning Architecture to Improve the Structured Text Classification
Information (Switzerland), Vol. 13, Núm. 6
2021
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Classification of full text biomedical documents: Sections importance assessment
Applied Sciences (Switzerland), Vol. 11, Núm. 6
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Computational Resources and Strategies to Construct Single-Molecule Models of FISH
Methods in Molecular Biology (Humana Press Inc.), pp. 317-330
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Computational resources and strategies to assess single-molecule dynamics of the translation process in S. cerevisiae
Briefings in bioinformatics, Vol. 22, Núm. 1, pp. 219-231
2020
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An RNA-seq Based Machine Learning Approach Identifies Latent Tuberculosis Patients With an Active Tuberculosis Profile
Frontiers in Immunology, Vol. 11
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Application of Agent-Based Modelling to Simulate Ribosome Translation
Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)
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Inferences on Mycobacterium Leprae Host Immune Response Escape and Antibiotic Resistance Using Genomic Data and GenomeFastScreen
Practical Applications of Computational Biology & Bioinformatics: 14th International Conference (PACBB 2020)
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Ultrasonic-assisted extraction and digestion of proteins from solid biopsies followed by peptide sequential extraction hyphenated to MALDI-based profiling holds the promise of distinguishing renal oncocytoma from chromophobe renal cell carcinoma
Talanta, Vol. 206
2019
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A bioinformatics protocol for quickly creating large-scale phylogenetic trees
Advances in Intelligent Systems and Computing
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Application of agent-based modelling to assess single-molecule transport across the cell envelope of E. coli
Computers in Biology and Medicine, Vol. 107, pp. 218-226
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Bioinformatics Protocols for Quickly Obtaining Large-Scale Data Sets for Phylogenetic Inferences
Interdisciplinary Sciences: Computational Life Sciences, Vol. 11, Núm. 1
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Comparative Study of Feature Selection Methods for Medical Full Text Classification
Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)
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DEWE: A novel tool for executing differential expression RNA-Seq workflows in biomedical research
Computers in Biology and Medicine, Vol. 107, pp. 197-205
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EvoPPI 1.0: a Web Platform for Within- and Between-Species Multiple Interactome Comparisons and Application to Nine PolyQ Proteins Determining Neurodegenerative Diseases
Interdisciplinary Sciences: Computational Life Sciences, Vol. 11, Núm. 1, pp. 45-56
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EvoPPI: A web application to compare protein-protein interactions (PPIs) from different databases and species
Advances in Intelligent Systems and Computing