
JOAO MIGUEL
FERNANDES ALVES
LICENCIADO - ENXEÑEIRO (GRUPO I)
Publicacións (73) Publicacións de JOAO MIGUEL FERNANDES ALVES
2024
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Genome sequences of nine Clostridium scindens strains isolated from human feces
Microbiology Resource Announcements, Vol. 13, Núm. 11
2023
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Complete genome sequence of the archetype bile acid 7α-dehydroxylating bacterium, Clostridium scindens VPI12708, isolated from human feces, circa 1980
Microbiology Resource Announcements, Vol. 12, Núm. 9
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Genomes of Endotrypanum monterogeii from Panama and Zelonia costaricensis from Brazil: Expansion of Multigene Families in Leishmaniinae Parasites That Are Close Relatives of Leishmania spp.
Pathogens, Vol. 12, Núm. 12
2022
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CellPhy: accurate and fast probabilistic inference of single-cell phylogenies from scDNA-seq data
Genome Biology, Vol. 23, Núm. 1
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Clonality and timing of relapsing colorectal cancer metastasis revealed through whole-genome single-cell sequencing
Cancer Letters, Vol. 543
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Comparative analysis of capture methods for genomic profiling of circulating tumor cells in colorectal cancer
Genomics, Vol. 114, Núm. 6
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Formation of secondary allo-bile acids by novel enzymes from gut Firmicutes
Gut Microbes, Vol. 14, Núm. 1
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Genetic and morphological polymorphisms of Aedes scapularis (Diptera: Culicidae), vector of filariae and arboviruses
Infection, Genetics and Evolution, Vol. 97
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SIEVE: joint inference of single-nucleotide variants and cell phylogeny from single-cell DNA sequencing data
Genome Biology, Vol. 23, Núm. 1
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Single-cell mtDNA heteroplasmy in colorectal cancer
Genomics, Vol. 114, Núm. 2
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The Importance of Glycerophospholipid Production to the Mutualist Symbiosis of Trypanosomatids
Pathogens, Vol. 11, Núm. 1
2021
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Completion of the gut microbial epi-bile acid pathway
Gut Microbes, Vol. 13, Núm. 1, pp. 1-20
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Editorial: Symbioses Between Protists and Bacteria/Archaea
Frontiers in Microbiology
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Endosymbiont capture, a repeated process of endosymbiont transfer with replacement in Trypanosomatids angomonas Spp.
Pathogens, Vol. 10, Núm. 6
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Phylogeny and temporal diversification of mosquitoes (Diptera: Culicidae) with an emphasis on the Neotropical fauna
Systematic Entomology, Vol. 46, Núm. 4, pp. 798-811
2020
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A collection of bacterial isolates from the pig intestine reveals functional and taxonomic diversity
Nature Communications, Vol. 11, Núm. 1
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Bacterial steroid-17,20-desmolase is a taxonomically rare enzymatic pathway that converts prednisone to 1,4-androstanediene-3,11,17-trione, a metabolite that causes proliferation of prostate cancer cells
Journal of Steroid Biochemistry and Molecular Biology, Vol. 199
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Population genomics reveals the expansion of highly inbred plasmodium vivax lineages in the main malaria hotspot of Brazil
PLoS Neglected Tropical Diseases, Vol. 14, Núm. 10, pp. 1-16
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The ‘in vivo lifestyle’ of bile acid 7α-dehydroxylating bacteria: comparative genomics, metatranscriptomic, and bile acid metabolomics analysis of a defined microbial community in gnotobiotic mice
Gut Microbes, Vol. 11, Núm. 3, pp. 381-404
2019
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Clostridium scindens ATCC 35704: Integration of nutritional requirements, the complete genome sequence, and global transcriptional responses to bile acids
Applied and Environmental Microbiology, Vol. 85, Núm. 7