Publications (66) ALEJANDRO FERNANDEZ VILLAVERDE publications

2024

  1. Corrigendum to “Controllability and accessibility analysis of nonlinear biosystems” [Computer Methods and Programs in Biomedicine 242 (2023) 107837] (Computer Methods and Programs in Biomedicine (2023) 242, (S0169260723005035), (10.1016/j.cmpb.2023.107837))

    Computer Methods and Programs in Biomedicine

  2. Modelado e Simulación de Sistemas Biomédicos

    Servizo de Publicacións

2023

  1. Assessment of Prediction Uncertainty Quantification Methods in Systems Biology

    IEEE/ACM Transactions on Computational Biology and Bioinformatics, Vol. 20, Núm. 3, pp. 1725-1736

  2. AutoRepar: A method to obtain identifiable and observable reparameterizations of dynamic models with mechanistic insights

    International Journal of Robust and Nonlinear Control, Vol. 33, Núm. 9, pp. 5039-5057

  3. Benchmarking tools for a priori identifiability analysis

    Bioinformatics, Vol. 39, Núm. 2

  4. Benchmarking tools for a priori identifiability analysis

    Bioinformatics (Oxford, England), Vol. 39, Núm. 2

  5. Controllability and accessibility analysis of nonlinear biosystems

    Computer Methods and Programs in Biomedicine, Vol. 242

  6. Distilling identifiable and interpretable dynamic models from biological data

    PLoS Computational Biology, Vol. 19, Núm. 10

  7. Improving dynamic predictions with ensembles of observable models

    Bioinformatics (Oxford, England), Vol. 39, Núm. 1

  8. On the Origins and Rarity of Locally but Not Globally Identifiable Parameters in Biological Modeling

    IEEE Access, Vol. 11, pp. 65457-65467

  9. STRIKE-GOLDD 4.0: user-friendly, efficient analysis of structural identifiability and observability

    Bioinformatics (Oxford, England), Vol. 39, Núm. 1

  10. Structural Identifiability and Observability of Microbial Community Models

    Bioengineering, Vol. 10, Núm. 4

2022

  1. A protocol for dynamic model calibration

    Briefings in bioinformatics, Vol. 23, Núm. 1

  2. Smooth Non Linear High Gain Observers for a Class of Dynamical Systems

    IEEE Access, Vol. 10, pp. 3693-3704

  3. Symmetries in Dynamic Models of Biological Systems: Mathematical Foundations and Implications

    Symmetry, Vol. 14, Núm. 3

2021

  1. On testing structural identifiability by a simple scaling method: Relying on scaling symmetries can be misleading

    PLoS Computational Biology, Vol. 17, Núm. 10

  2. PEtab - Interoperable specification of parameter estimation problems in systems biology

    PLoS Computational Biology, Vol. 17, Núm. 1

  3. Structural identifiability and observability of compartmental models of the COVID-19 pandemic

    Annual Reviews in Control, Vol. 51, pp. 441-459

2020

  1. Finding and breaking lie symmetries: Implications for structural identifiability and observability in biological modelling

    Symmetry, Vol. 12, Núm. 3

  2. Nonlinear observability algorithms with known and unknown inputs: Analysis and implementation

    Mathematics, Vol. 8, Núm. 11, pp. 1-27