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ALEJANDRO
FERNANDEZ VILLAVERDE
INVESTIGADORES "RAMÓN Y CAJAL"
Publications (67) Publications de ALEJANDRO FERNANDEZ VILLAVERDE
2024
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Corrigendum to “Controllability and accessibility analysis of nonlinear biosystems” [Computer Methods and Programs in Biomedicine 242 (2023) 107837] (Computer Methods and Programs in Biomedicine (2023) 242, (S0169260723005035), (10.1016/j.cmpb.2023.107837))
Computer Methods and Programs in Biomedicine
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Modelado e Simulación de Sistemas Biomédicos
Servizo de Publicacións
2023
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Assessment of Prediction Uncertainty Quantification Methods in Systems Biology
IEEE/ACM Transactions on Computational Biology and Bioinformatics, Vol. 20, Núm. 3, pp. 1725-1736
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AutoRepar: A method to obtain identifiable and observable reparameterizations of dynamic models with mechanistic insights
International Journal of Robust and Nonlinear Control, Vol. 33, Núm. 9, pp. 5039-5057
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Benchmarking tools for a priori identifiability analysis
Bioinformatics (Oxford, England), Vol. 39, Núm. 2
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Benchmarking tools for a priori identifiability analysis
Bioinformatics, Vol. 39, Núm. 2
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Controllability and accessibility analysis of nonlinear biosystems
Computer Methods and Programs in Biomedicine, Vol. 242
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Distilling identifiable and interpretable dynamic models from biological data
PLoS Computational Biology, Vol. 19, Núm. 10
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Improving dynamic predictions with ensembles of observable models
Bioinformatics (Oxford, England), Vol. 39, Núm. 1
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On the Origins and Rarity of Locally but Not Globally Identifiable Parameters in Biological Modeling
IEEE Access, Vol. 11, pp. 65457-65467
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STRIKE-GOLDD 4.0: user-friendly, efficient analysis of structural identifiability and observability
Bioinformatics (Oxford, England), Vol. 39, Núm. 1
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Structural Identifiability and Observability of Microbial Community Models
Bioengineering, Vol. 10, Núm. 4
2022
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A protocol for dynamic model calibration
Briefings in bioinformatics, Vol. 23, Núm. 1
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Smooth Non Linear High Gain Observers for a Class of Dynamical Systems
IEEE Access, Vol. 10, pp. 3693-3704
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Symmetries in Dynamic Models of Biological Systems: Mathematical Foundations and Implications
Symmetry, Vol. 14, Núm. 3
2021
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On testing structural identifiability by a simple scaling method: Relying on scaling symmetries can be misleading
PLoS Computational Biology, Vol. 17, Núm. 10
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PEtab - Interoperable specification of parameter estimation problems in systems biology
PLoS Computational Biology, Vol. 17, Núm. 1
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Structural identifiability and observability of compartmental models of the COVID-19 pandemic
Annual Reviews in Control, Vol. 51, pp. 441-459
2020
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Finding and breaking lie symmetries: Implications for structural identifiability and observability in biological modelling
Symmetry, Vol. 12, Núm. 3
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Nonlinear observability algorithms with known and unknown inputs: Analysis and implementation
Mathematics, Vol. 8, Núm. 11, pp. 1-27