Publicaciones (86) Publicaciones de HUGO LOPEZ FERNANDEZ

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2025

  1. Fcodes: A Straightforward Algorithm for Kinships Encoding

    Lecture Notes in Networks and Systems

  2. PPI Prediction from Sequences via Transfer Learning on Balanced but yet Biased Datasets: An Open Problem

    Lecture Notes in Networks and Systems

  3. PolyDeep Advance 1: Clinical Validation of a Computer-Aided Detection System for Colorectal Polyp Detection with a Second Observer Design

    Diagnostics, Vol. 15, Núm. 4

  4. Predicting Which Mitophagy Proteins Are Dysregulated in Spinocerebellar Ataxia Type 3 (SCA3) Using the Auto-p2docking Pipeline

    International Journal of Molecular Sciences, Vol. 26, Núm. 3

  5. Streamlining SEDA Pipelines with Compi: The Power of Convention over Configuration

    Lecture Notes in Networks and Systems

  6. Towards a more accurate and reliable evaluation of machine learning protein-protein interaction prediction model performance in the presence of unavoidable dataset biases

    JOURNAL OF INTEGRATIVE BIOINFORMATICS

2024

  1. Multiple Lines of Evidence Support 199 SARS-CoV-2 Positively Selected Amino Acid Sites

    International Journal of Molecular Sciences, Vol. 25, Núm. 4

  2. Optical diagnosis in still images of colorectal polyps: comparison between expert endoscopists and PolyDeep, a Computer-Aided Diagnosis system

    Frontiers in Oncology, Vol. 14

  3. SEDA 2024 update: enhancing the SEquence DAtaset builder for seamless integration into automated data analysis pipelines

    BMC Bioinformatics, Vol. 25, Núm. 1

  4. Structural health monitoring of concrete constructions using BIM and non-destructive techniques

    Procedia Structural Integrity

2023

  1. Auto-phylo: a pipeline maker for phylogenetic studies

    Practical applications of computational biology and bioinformatics, 17th International Conference (PACBB 2023)

  2. EvoPPI 2: A Web and Local Platform for the Comparison of Protein–Protein Interaction Data from Multiple Sources from the Same and Distinct Species

    Lecture Notes in Networks and Systems

  3. MiRNA Differences Related to Treatment-Resistant Schizophrenia

    International Journal of Molecular Sciences, Vol. 24, Núm. 3

  4. MyBrain-Seq: A Pipeline for MiRNA-Seq Data Analysis in Neuropsychiatric Disorders

    Biomedicines, Vol. 11, Núm. 4

  5. Negative Samples for Improving Object Detection—A Case Study in AI-Assisted Colonoscopy for Polyp Detection

    Diagnostics, Vol. 13, Núm. 5

  6. On the identification of potential novel therapeutic targets for spinocerebellar ataxia type 1 (SCA1) neurodegenerative disease using EvoPPI3

    Journal of integrative bioinformatics, Vol. 20, Núm. 2

  7. PanDrugs2: Prioritizing cancer therapies using integrated individual multi-omics data

    Nucleic Acids Research, Vol. 51, Núm. W1, pp. W411-W418

  8. Pathway-guided monitoring of the disease course in bladder cancer with longitudinal urine proteomics

    COMMUNICATIONS MEDICINE, Vol. 3, Núm. 1

  9. Proteomic analysis of chromophobe renal cell carcinoma and benign renal oncocytoma biopsies reveals shared metabolic dysregulation

    Clinical Proteomics, Vol. 20, Núm. 1

  10. Towards a flexible and portable workflow for analyzing miRNA-Seq neuropsychiatric data: an initial replicability assessment

    Lecture Notes in Networks and Systems